Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
PdfS4R2K0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
PdfS4R2K0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.06□□□□□ -0.8
PdfS4R2K0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
PdfS4R2K0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.06□□□□□ -0.8
PdfS4R2K0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.06□□□□□ -0.8
PdfS4R2K0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PdfS4R2K0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.05□□□□□ -0.8
PdfS4R2K0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.05□□□□□ -0.8
PdfS4R2K0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm6415-201ENSMUST00000118488 348 ntBASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm5779-201ENSMUST00000218467 910 ntBASIC10.05□□□□□ -0.8
PdfS4R2K0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.05□□□□□ -0.8
PdfS4R2K0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
PdfS4R2K0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
PdfS4R2K0 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms