Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 MRPS18AP1-201ENST00000414458 589 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AC245100.5-201ENST00000452108 331 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 RNA5SP410-201ENST00000516285 106 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 SPDYE22P-201ENST00000582158 798 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 RN7SL828P-201ENST00000607615 303 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 AL662799.1-202ENST00000614205 422 ntBASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 MIR648-201ENST00000385046 94 ntBASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 MIR4321-201ENST00000592276 80 ntBASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 BTBD7P1-201ENST00000447253 1453 ntBASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXD3Q9UJU5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 OR6D1P-203ENST00000641209 4860 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 GK-202ENST00000378941 458 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 MTND6P24-201ENST00000440466 518 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC009477.1-201ENST00000452936 217 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms