Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk1aQ9D132 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk1aQ9D132 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk1aQ9D132 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm13616-201ENSMUST00000120600 222 ntBASIC12.41□□□□□ -0.42
Upk1aQ9D132 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.41□□□□□ -0.42
Upk1aQ9D132 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk1aQ9D132 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.41□□□□□ -0.42
Upk1aQ9D132 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk1aQ9D132 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Upk1aQ9D132 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk1aQ9D132 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk1aQ9D132 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.39□□□□□ -0.43
Upk1aQ9D132 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.39□□□□□ -0.43
Upk1aQ9D132 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.39□□□□□ -0.43
Upk1aQ9D132 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.39□□□□□ -0.43
Upk1aQ9D132 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms