Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.14■□□□□ 0.01
Smc1bQ920F6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.14■□□□□ 0.01
Smc1bQ920F6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smc1bQ920F6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
Smc1bQ920F6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Gm22323-201ENSMUST00000103832 109 ntBASIC15.13■□□□□ 0.01
Smc1bQ920F6 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.13■□□□□ 0.01
Smc1bQ920F6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.13■□□□□ 0.01
Smc1bQ920F6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smc1bQ920F6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.12■□□□□ 0.01
Smc1bQ920F6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Gm25927-201ENSMUST00000175058 117 ntBASIC15.12■□□□□ 0.01
Smc1bQ920F6 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.12■□□□□ 0.01
Smc1bQ920F6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.12■□□□□ 0.01
Smc1bQ920F6 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.12■□□□□ 0.01
Smc1bQ920F6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Smc1bQ920F6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Mir686-201ENSMUST00000102174 109 ntBASIC15.11■□□□□ 0.01
Smc1bQ920F6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.11■□□□□ 0.01
Smc1bQ920F6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.11■□□□□ 0.01
Smc1bQ920F6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc1bQ920F6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms