Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm37497-201ENSMUST00000195830 798 ntBASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm6447-201ENSMUST00000118905 835 ntBASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndc1Q8VCB1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm16202-201ENSMUST00000117532 544 ntBASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms