Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Mir7686-201ENSMUST00000200604 57 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm12165-201ENSMUST00000117047 342 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm9540-201ENSMUST00000188230 478 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm8365-201ENSMUST00000197334 648 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cps1Q8C196 Gm21811-201ENSMUST00000096485 930 ntBASIC17.26■□□□□ 0.35
Cps1Q8C196 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cps1Q8C196 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Gm6580-201ENSMUST00000117504 1357 ntBASIC17.25■□□□□ 0.35
Cps1Q8C196 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC17.25■□□□□ 0.35
Cps1Q8C196 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cps1Q8C196 Gm10752-201ENSMUST00000218348 729 ntBASIC17.25■□□□□ 0.35
Cps1Q8C196 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC17.25■□□□□ 0.35
Cps1Q8C196 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cps1Q8C196 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cps1Q8C196 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.24■□□□□ 0.35
Cps1Q8C196 Gm15432-201ENSMUST00000121106 195 ntBASIC17.24■□□□□ 0.35
Cps1Q8C196 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC17.24■□□□□ 0.35
Cps1Q8C196 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC17.24■□□□□ 0.35
Cps1Q8C196 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Gm5732-201ENSMUST00000182596 1007 ntBASIC17.24■□□□□ 0.35
Cps1Q8C196 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 AC135469.1-201ENSMUST00000225984 772 ntBASIC17.24■□□□□ 0.35
Cps1Q8C196 AC133602.1-201ENSMUST00000227510 509 ntBASIC17.24■□□□□ 0.35
Cps1Q8C196 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cps1Q8C196 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cps1Q8C196 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cps1Q8C196 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cps1Q8C196 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cps1Q8C196 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cps1Q8C196 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cps1Q8C196 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cps1Q8C196 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cps1Q8C196 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC17.23■□□□□ 0.35
Cps1Q8C196 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.23■□□□□ 0.35
Cps1Q8C196 Gm28071-201ENSMUST00000190355 478 ntBASIC17.23■□□□□ 0.35
Cps1Q8C196 Gm4482-201ENSMUST00000200876 742 ntBASIC17.23■□□□□ 0.35
Cps1Q8C196 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cps1Q8C196 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms