Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.94□□□□□ -0.34
Ubp1Q811S7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.94□□□□□ -0.34
Ubp1Q811S7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ubp1Q811S7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 1495 ms