Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shroom1Q5SX79 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gm6447-201ENSMUST00000118905 835 ntBASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gm45930-201ENSMUST00000221330 292 ntBASIC13.94□□□□□ -0.18
Shroom1Q5SX79 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shroom1Q5SX79 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Shroom1Q5SX79 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms