Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm13392-201ENSMUST00000117708 150 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm12203-201ENSMUST00000118235 598 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm12209-201ENSMUST00000120089 596 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm26927-201ENSMUST00000182385 965 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm37922-201ENSMUST00000195596 455 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.4□□□□□ -0.42
Nkx3-2P97503 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx3-2P97503 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Nkx3-2P97503 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx3-2P97503 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx3-2P97503 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx3-2P97503 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.39□□□□□ -0.43
Nkx3-2P97503 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.39□□□□□ -0.43
Nkx3-2P97503 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Gm40466-201ENSMUST00000212174 422 ntBASIC12.39□□□□□ -0.43
Nkx3-2P97503 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Gm10478-201ENSMUST00000084451 396 ntBASIC12.39□□□□□ -0.43
Nkx3-2P97503 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx3-2P97503 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms