Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm14208-201ENSMUST00000119645 678 ntBASIC12.09□□□□□ -0.47
Cacna1aP97445 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm5070-201ENSMUST00000177599 862 ntBASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.08□□□□□ -0.47
Cacna1aP97445 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Gm15131-201ENSMUST00000119124 595 ntBASIC12.08□□□□□ -0.47
Cacna1aP97445 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Cacna1aP97445 Gm13097-201ENSMUST00000210722 397 ntBASIC12.08□□□□□ -0.47
Cacna1aP97445 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.08□□□□□ -0.47
Cacna1aP97445 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cacna1aP97445 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.08□□□□□ -0.48
Cacna1aP97445 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cacna1aP97445 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cacna1aP97445 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm23270-201ENSMUST00000104055 131 ntBASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.07□□□□□ -0.48
Cacna1aP97445 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.07□□□□□ -0.48
Cacna1aP97445 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cacna1aP97445 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.07□□□□□ -0.48
Cacna1aP97445 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cacna1aP97445 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms