Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh6P54276 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.48■□□□□ 0.23
Msh6P54276 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.48■□□□□ 0.23
Msh6P54276 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.48■□□□□ 0.23
Msh6P54276 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.48■□□□□ 0.23
Msh6P54276 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh6P54276 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.48■□□□□ 0.23
Msh6P54276 Gm43947-201ENSMUST00000203019 959 ntBASIC16.48■□□□□ 0.23
Msh6P54276 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh6P54276 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh6P54276 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.47■□□□□ 0.23
Msh6P54276 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Msh6P54276 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msh6P54276 Gm14208-201ENSMUST00000119645 678 ntBASIC16.47■□□□□ 0.23
Msh6P54276 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Msh6P54276 Gm24514-201ENSMUST00000174961 285 ntBASIC16.47■□□□□ 0.23
Msh6P54276 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Msh6P54276 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.47■□□□□ 0.23
Msh6P54276 Gm19208-201ENSMUST00000213861 912 ntBASIC16.47■□□□□ 0.23
Msh6P54276 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Msh6P54276 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Msh6P54276 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.47■□□□□ 0.23
Msh6P54276 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh6P54276 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.46■□□□□ 0.23
Msh6P54276 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Gm14277-201ENSMUST00000121195 360 ntBASIC16.46■□□□□ 0.23
Msh6P54276 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.46■□□□□ 0.23
Msh6P54276 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Msh6P54276 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.46■□□□□ 0.23
Msh6P54276 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.46■□□□□ 0.23
Msh6P54276 Gm38092-201ENSMUST00000195600 653 ntBASIC16.46■□□□□ 0.23
Msh6P54276 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.46■□□□□ 0.23
Msh6P54276 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh6P54276 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms