Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.65□□□□□ -0.38
Tnfsf4P43488 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf4P43488 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.65□□□□□ -0.39
Tnfsf4P43488 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.65□□□□□ -0.39
Tnfsf4P43488 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.65□□□□□ -0.39
Tnfsf4P43488 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Mir6956-201ENSMUST00000183598 62 ntBASIC12.64□□□□□ -0.39
Tnfsf4P43488 Mir7684-201ENSMUST00000183858 60 ntBASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm42550-201ENSMUST00000201553 960 ntBASIC12.64□□□□□ -0.39
Tnfsf4P43488 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.64□□□□□ -0.39
Tnfsf4P43488 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfsf4P43488 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf4P43488 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms