Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc6P10629 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc6P10629 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc6P10629 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc6P10629 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc6P10629 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc6P10629 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc6P10629 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Mir874-201ENSMUST00000104769 76 ntBASIC14.46□□□□□ -0.09
Hoxc6P10629 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hoxc6P10629 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.46□□□□□ -0.09
Hoxc6P10629 Gm44405-201ENSMUST00000198952 126 ntBASIC14.46□□□□□ -0.09
Hoxc6P10629 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.46□□□□□ -0.09
Hoxc6P10629 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc6P10629 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc6P10629 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.46□□□□□ -0.09
Hoxc6P10629 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc6P10629 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc6P10629 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc6P10629 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc6P10629 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc6P10629 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm14263-201ENSMUST00000117955 746 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm14208-201ENSMUST00000119645 678 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Mir6927-201ENSMUST00000184494 71 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm42997-202ENSMUST00000200321 985 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Gm22058-201ENSMUST00000083393 310 ntBASIC14.45□□□□□ -0.1
Hoxc6P10629 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc6P10629 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc6P10629 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc6P10629 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.44□□□□□ -0.1
Hoxc6P10629 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc6P10629 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc6P10629 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms