Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.41□□□□□ -0.42
ApoeP08226 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Gm24447-201ENSMUST00000083977 338 ntBASIC12.41□□□□□ -0.42
ApoeP08226 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.41□□□□□ -0.42
ApoeP08226 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ApoeP08226 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ApoeP08226 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.4□□□□□ -0.42
ApoeP08226 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
ApoeP08226 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ApoeP08226 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
ApoeP08226 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ApoeP08226 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ApoeP08226 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.4□□□□□ -0.42
ApoeP08226 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ApoeP08226 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ApoeP08226 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ApoeP08226 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ApoeP08226 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ApoeP08226 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.39□□□□□ -0.43
ApoeP08226 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
ApoeP08226 Gm5264-201ENSMUST00000190584 848 ntBASIC12.39□□□□□ -0.43
ApoeP08226 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.39□□□□□ -0.43
ApoeP08226 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ApoeP08226 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ApoeP08226 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms