Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P06344 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.69□□□□□ -0.54
P06344 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.69□□□□□ -0.54
P06344 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
P06344 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.69□□□□□ -0.54
P06344 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.69□□□□□ -0.54
P06344 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
P06344 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.69□□□□□ -0.54
P06344 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.69□□□□□ -0.54
P06344 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
P06344 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.68□□□□□ -0.54
P06344 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P06344 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.68□□□□□ -0.54
P06344 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Gm13123-201ENSMUST00000122173 492 ntBASIC11.68□□□□□ -0.54
P06344 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.68□□□□□ -0.54
P06344 Gm37497-201ENSMUST00000195830 798 ntBASIC11.68□□□□□ -0.54
P06344 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.68□□□□□ -0.54
P06344 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P06344 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06344 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.68□□□□□ -0.54
P06344 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.68□□□□□ -0.54
P06344 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
P06344 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.67□□□□□ -0.54
P06344 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.67□□□□□ -0.54
P06344 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.67□□□□□ -0.54
P06344 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P06344 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
P06344 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.67□□□□□ -0.54
P06344 Gm12957-201ENSMUST00000117835 377 ntBASIC11.67□□□□□ -0.54
P06344 Gm12384-201ENSMUST00000119228 919 ntBASIC11.67□□□□□ -0.54
P06344 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P06344 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.67□□□□□ -0.54
P06344 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.67□□□□□ -0.54
P06344 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
P06344 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
P06344 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.67□□□□□ -0.54
P06344 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06344 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms