Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.39□□□□□ -0.27
P01878 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P01878 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.39□□□□□ -0.27
P01878 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.39□□□□□ -0.27
P01878 Rps4l-202ENSMUST00000204242 789 ntBASIC13.39□□□□□ -0.27
P01878 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.39□□□□□ -0.27
P01878 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.39□□□□□ -0.27
P01878 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P01878 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.39□□□□□ -0.27
P01878 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
P01878 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P01878 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.39□□□□□ -0.27
P01878 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P01878 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P01878 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P01878 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.39□□□□□ -0.27
P01878 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.38□□□□□ -0.27
P01878 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P01878 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.38□□□□□ -0.27
P01878 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
P01878 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.38□□□□□ -0.27
P01878 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Gm8018-201ENSMUST00000173536 789 ntBASIC13.38□□□□□ -0.27
P01878 Gm27341-201ENSMUST00000183570 106 ntBASIC13.38□□□□□ -0.27
P01878 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Gm45925-201ENSMUST00000218882 744 ntBASIC13.38□□□□□ -0.27
P01878 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.38□□□□□ -0.27
P01878 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.38□□□□□ -0.27
P01878 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
P01878 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.38□□□□□ -0.27
P01878 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.38□□□□□ -0.27
P01878 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P01878 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P01878 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Gm13665-201ENSMUST00000120830 528 ntBASIC13.37□□□□□ -0.27
P01878 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.37□□□□□ -0.27
P01878 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P01878 Gm27046-201ENSMUST00000182160 463 ntBASIC13.37□□□□□ -0.27
P01878 Gm3096-201ENSMUST00000185770 364 ntBASIC13.37□□□□□ -0.27
P01878 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01878 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms