Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hcn1O88704 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Hcn1O88704 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcn1O88704 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Hcn1O88704 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Hcn1O88704 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.56□□□□□ -0.4
Hcn1O88704 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Hcn1O88704 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Hcn1O88704 Gm15770-201ENSMUST00000117498 584 ntBASIC12.56□□□□□ -0.4
Hcn1O88704 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
Hcn1O88704 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.56□□□□□ -0.4
Hcn1O88704 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.56□□□□□ -0.4
Hcn1O88704 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.56□□□□□ -0.4
Hcn1O88704 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.56□□□□□ -0.4
Hcn1O88704 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.56□□□□□ -0.4
Hcn1O88704 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hcn1O88704 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.55□□□□□ -0.4
Hcn1O88704 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hcn1O88704 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.55□□□□□ -0.4
Hcn1O88704 Gm28911-201ENSMUST00000188837 117 ntBASIC12.55□□□□□ -0.4
Hcn1O88704 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.55□□□□□ -0.4
Hcn1O88704 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.55□□□□□ -0.4
Hcn1O88704 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hcn1O88704 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hcn1O88704 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.55□□□□□ -0.4
Hcn1O88704 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms