Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Gm44335-201ENSMUST00000196879 141 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Gm44297-201ENSMUST00000198304 141 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Gm44346-201ENSMUST00000198851 141 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.9□□□□□ -0.5
Matn3O35701 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Matn3O35701 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.9□□□□□ -0.51
Matn3O35701 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Matn3O35701 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Matn3O35701 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.89□□□□□ -0.51
Matn3O35701 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Matn3O35701 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Matn3O35701 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Matn3O35701 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.89□□□□□ -0.51
Matn3O35701 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.89□□□□□ -0.51
Matn3O35701 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.89□□□□□ -0.51
Matn3O35701 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Matn3O35701 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.89□□□□□ -0.51
Matn3O35701 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.89□□□□□ -0.51
Matn3O35701 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.89□□□□□ -0.51
Matn3O35701 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.89□□□□□ -0.51
Matn3O35701 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.89□□□□□ -0.51
Matn3O35701 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn3O35701 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.88□□□□□ -0.51
Matn3O35701 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.88□□□□□ -0.51
Matn3O35701 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.88□□□□□ -0.51
Matn3O35701 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Gm11745-201ENSMUST00000121669 448 ntBASIC11.88□□□□□ -0.51
Matn3O35701 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.88□□□□□ -0.51
Matn3O35701 Mir6990-201ENSMUST00000183724 91 ntBASIC11.88□□□□□ -0.51
Matn3O35701 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.88□□□□□ -0.51
Matn3O35701 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.88□□□□□ -0.51
Matn3O35701 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.88□□□□□ -0.51
Matn3O35701 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Matn3O35701 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms