Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Polr1aO35134 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Polr1aO35134 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC19.77■□□□□ 0.75
Polr1aO35134 Gm17827-201ENSMUST00000211825 742 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 AC107638.1-201ENSMUST00000213690 1061 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 AC125486.1-201ENSMUST00000218701 320 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Polr1aO35134 Gm11989-201ENSMUST00000117240 672 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 Gm11362-201ENSMUST00000118838 850 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.76■□□□□ 0.75
Polr1aO35134 Gm44958-201ENSMUST00000203734 736 ntBASIC19.76■□□□□ 0.75
Polr1aO35134 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC19.76■□□□□ 0.75
Polr1aO35134 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC19.76■□□□□ 0.75
Polr1aO35134 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC19.76■□□□□ 0.75
Polr1aO35134 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr1aO35134 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Polr1aO35134 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Polr1aO35134 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Polr1aO35134 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Gm13461-201ENSMUST00000120980 662 ntBASIC19.75■□□□□ 0.75
Polr1aO35134 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC19.75■□□□□ 0.75
Polr1aO35134 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC19.75■□□□□ 0.75
Polr1aO35134 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Polr1aO35134 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Polr1aO35134 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr1aO35134 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Polr1aO35134 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Gm13035-201ENSMUST00000117496 342 ntBASIC19.74■□□□□ 0.75
Polr1aO35134 Gm6039-201ENSMUST00000121667 1250 ntBASIC19.74■□□□□ 0.75
Polr1aO35134 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC19.74■□□□□ 0.75
Polr1aO35134 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC19.74■□□□□ 0.75
Polr1aO35134 Olfr1347-205ENSMUST00000220413 964 ntBASIC19.74■□□□□ 0.75
Polr1aO35134 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Polr1aO35134 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Gm43081-201ENSMUST00000199082 1380 ntBASIC19.74■□□□□ 0.75
Polr1aO35134 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.74■□□□□ 0.75
Polr1aO35134 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr1aO35134 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Polr1aO35134 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Polr1aO35134 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC19.73■□□□□ 0.75
Polr1aO35134 AC154305.4-201ENSMUST00000224520 614 ntBASIC19.73■□□□□ 0.75
Polr1aO35134 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Gm6506-201ENSMUST00000119775 1136 ntBASIC19.73■□□□□ 0.75
Polr1aO35134 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Gm21027-201ENSMUST00000219300 1236 ntBASIC19.73■□□□□ 0.75
Polr1aO35134 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Polr1aO35134 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC19.73■□□□□ 0.75
Polr1aO35134 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms