Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
AlyrefO08583 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AlyrefO08583 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.3□□□□□ -0.28
AlyrefO08583 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AlyrefO08583 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AlyrefO08583 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.3□□□□□ -0.28
AlyrefO08583 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AlyrefO08583 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.3□□□□□ -0.28
AlyrefO08583 Gm20392-201ENSMUST00000173047 701 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Gm3890-201ENSMUST00000182416 207 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.3□□□□□ -0.28
AlyrefO08583 Gm28324-201ENSMUST00000187913 264 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
AlyrefO08583 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
AlyrefO08583 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AlyrefO08583 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AlyrefO08583 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.3□□□□□ -0.28
AlyrefO08583 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
AlyrefO08583 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
AlyrefO08583 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Gm7666-201ENSMUST00000146631 819 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.29□□□□□ -0.28
AlyrefO08583 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Gm8365-201ENSMUST00000197334 648 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
AlyrefO08583 Grk6-205ENSMUST00000224653 2976 ntBASIC13.29□□□□□ -0.28
AlyrefO08583 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AlyrefO08583 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AlyrefO08583 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
AlyrefO08583 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
AlyrefO08583 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
AlyrefO08583 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AlyrefO08583 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AlyrefO08583 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AlyrefO08583 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AlyrefO08583 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms