Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm20426-201ENSMUST00000173657 440 ntBASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hdac6Q9Z2V5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Hdac6Q9Z2V5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm7003-201ENSMUST00000195089 312 ntBASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hdac6Q9Z2V5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm19931-201ENSMUST00000198920 368 ntBASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gzmn-202ENSMUST00000225535 989 ntBASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Gm10312-201ENSMUST00000078515 489 ntBASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hdac6Q9Z2V5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hdac6Q9Z2V5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac6Q9Z2V5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac6Q9Z2V5 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.31■□□□□ 0.2
Hdac6Q9Z2V5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac6Q9Z2V5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms