Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scrt1Q99M85 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.53□□□□□ -0.56
Scrt1Q99M85 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scrt1Q99M85 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.52□□□□□ -0.57
Scrt1Q99M85 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.52□□□□□ -0.57
Scrt1Q99M85 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.52□□□□□ -0.57
Scrt1Q99M85 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scrt1Q99M85 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Mir698-201ENSMUST00000102164 109 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm14381-201ENSMUST00000122105 414 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm13786-201ENSMUST00000122371 333 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm8584-201ENSMUST00000171982 758 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm29741-201ENSMUST00000192667 421 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm37497-201ENSMUST00000195830 798 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Gm26315-201ENSMUST00000083890 321 ntBASIC11.51□□□□□ -0.57
Scrt1Q99M85 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scrt1Q99M85 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms