Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm3222-201ENSMUST00000071282 990 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Gm16476-201ENSMUST00000221544 139 ntBASIC13.23□□□□□ -0.29
Cdk9Q99J95 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdk9Q99J95 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gm15678-201ENSMUST00000117573 960 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gm27430-201ENSMUST00000184585 107 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gm21470-201ENSMUST00000187680 696 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gm44333-201ENSMUST00000197168 107 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdk9Q99J95 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Cdk9Q99J95 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk9Q99J95 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms