Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn1Q8K445 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clrn1Q8K445 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clrn1Q8K445 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Clrn1Q8K445 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Gm5687-201ENSMUST00000118252 640 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.39□□□□□ -0.43
Clrn1Q8K445 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn1Q8K445 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm5356-201ENSMUST00000093326 615 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.38□□□□□ -0.43
Clrn1Q8K445 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clrn1Q8K445 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn1Q8K445 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.37□□□□□ -0.43
Clrn1Q8K445 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms