Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lysmd4Q8CC84 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lysmd4Q8CC84 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lysmd4Q8CC84 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lysmd4Q8CC84 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms