Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim35Q8C006 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim35Q8C006 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm6973-201ENSMUST00000117080 721 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm15920-201ENSMUST00000118998 402 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm15573-201ENSMUST00000119487 540 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm25925-201ENSMUST00000158314 306 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm18737-201ENSMUST00000173594 937 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm43946-201ENSMUST00000204058 886 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm18690-201ENSMUST00000204488 985 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 CT030254.1-201ENSMUST00000225450 1078 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm6727-201ENSMUST00000204102 1518 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm20679-201ENSMUST00000177285 1402 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Gm7961-201ENSMUST00000201338 1436 ntBASIC14.4□□□□□ -0.1
Trim35Q8C006 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim35Q8C006 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm9597-202ENSMUST00000227632 1387 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm25287-201ENSMUST00000103846 110 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm22918-201ENSMUST00000103855 110 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim35Q8C006 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms