Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rad54bQ6PFE3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rad54bQ6PFE3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rad54bQ6PFE3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rad54bQ6PFE3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Mir6956-201ENSMUST00000183598 62 ntBASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.2□□□□□ -0.3
Rad54bQ6PFE3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rad54bQ6PFE3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms