Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Gli3Q61602 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gli3Q61602 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Ighv5-11-201ENSMUST00000193354 371 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC17.19■□□□□ 0.34
Gli3Q61602 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Gli3Q61602 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Gm5909-201ENSMUST00000119768 1281 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.19■□□□□ 0.34
Gli3Q61602 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Gm5513-201ENSMUST00000072982 1218 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gli3Q61602 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.19■□□□□ 0.34
Gli3Q61602 Gm5641-201ENSMUST00000091130 1488 ntBASIC17.19■□□□□ 0.34
Gli3Q61602 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gli3Q61602 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gli3Q61602 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Gm13263-201ENSMUST00000121271 838 ntBASIC17.18■□□□□ 0.34
Gli3Q61602 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Gli3Q61602 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.18■□□□□ 0.34
Gli3Q61602 AC164087.2-201ENSMUST00000216206 1072 ntBASIC17.18■□□□□ 0.34
Gli3Q61602 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC17.18■□□□□ 0.34
Gli3Q61602 AC136376.2-201ENSMUST00000228819 490 ntBASIC17.18■□□□□ 0.34
Gli3Q61602 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.18■□□□□ 0.34
Gli3Q61602 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Gli3Q61602 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gli3Q61602 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.17■□□□□ 0.34
Gli3Q61602 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.17■□□□□ 0.34
Gli3Q61602 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Gm8723-201ENSMUST00000166076 820 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Gm8701-201ENSMUST00000169259 874 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Gm20414-201ENSMUST00000172918 646 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Gm25998-201ENSMUST00000175397 53 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.17■□□□□ 0.34
Gli3Q61602 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms