Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.62□□□□□ -0.39
Col12a1Q60847 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm15595-201ENSMUST00000120840 961 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13022-201ENSMUST00000121181 285 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm44980-201ENSMUST00000205826 314 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm14005-208ENSMUST00000223654 681 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.62□□□□□ -0.39
Col12a1Q60847 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Mir8115-201ENSMUST00000184992 119 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Gm270-201ENSMUST00000223010 976 ntBASIC12.62□□□□□ -0.39
Col12a1Q60847 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col12a1Q60847 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col12a1Q60847 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.61□□□□□ -0.39
Col12a1Q60847 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col12a1Q60847 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.61□□□□□ -0.39
Col12a1Q60847 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm11979-201ENSMUST00000119629 743 ntBASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col12a1Q60847 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm16166-201ENSMUST00000118291 787 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm16071-201ENSMUST00000119589 793 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm23363-201ENSMUST00000175024 79 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm17826-201ENSMUST00000189720 798 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms