Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SgcdP82347 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.2□□□□□ -0.46
SgcdP82347 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SgcdP82347 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.2□□□□□ -0.46
SgcdP82347 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.2□□□□□ -0.46
SgcdP82347 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.2□□□□□ -0.46
SgcdP82347 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.2□□□□□ -0.46
SgcdP82347 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
SgcdP82347 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SgcdP82347 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SgcdP82347 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.19□□□□□ -0.46
SgcdP82347 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SgcdP82347 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.19□□□□□ -0.46
SgcdP82347 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SgcdP82347 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SgcdP82347 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.19□□□□□ -0.46
SgcdP82347 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.19□□□□□ -0.46
SgcdP82347 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.19□□□□□ -0.46
SgcdP82347 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SgcdP82347 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.19□□□□□ -0.46
SgcdP82347 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SgcdP82347 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.19□□□□□ -0.46
SgcdP82347 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.19□□□□□ -0.46
SgcdP82347 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcdP82347 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.18□□□□□ -0.46
SgcdP82347 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SgcdP82347 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SgcdP82347 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SgcdP82347 Gm18187-201ENSMUST00000196476 984 ntBASIC12.18□□□□□ -0.46
SgcdP82347 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.18□□□□□ -0.46
SgcdP82347 Gm9794-201ENSMUST00000202370 423 ntBASIC12.18□□□□□ -0.46
SgcdP82347 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SgcdP82347 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms