Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Shmt1P50431 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Gm27514-201ENSMUST00000183692 110 ntBASIC13.87□□□□□ -0.19
Shmt1P50431 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.87□□□□□ -0.19
Shmt1P50431 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.87□□□□□ -0.19
Shmt1P50431 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.87□□□□□ -0.19
Shmt1P50431 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.86□□□□□ -0.19
Shmt1P50431 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Shmt1P50431 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shmt1P50431 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.86□□□□□ -0.19
Shmt1P50431 Gm12363-201ENSMUST00000122250 668 ntBASIC13.86□□□□□ -0.19
Shmt1P50431 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.86□□□□□ -0.19
Shmt1P50431 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shmt1P50431 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.86□□□□□ -0.19
Shmt1P50431 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shmt1P50431 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt1P50431 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.85□□□□□ -0.19
Shmt1P50431 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.85□□□□□ -0.19
Shmt1P50431 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.85□□□□□ -0.19
Shmt1P50431 Gm5187-201ENSMUST00000117317 991 ntBASIC13.85□□□□□ -0.19
Shmt1P50431 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.85□□□□□ -0.19
Shmt1P50431 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.85□□□□□ -0.19
Shmt1P50431 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.85□□□□□ -0.19
Shmt1P50431 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.85□□□□□ -0.19
Shmt1P50431 Gm27572-201ENSMUST00000183702 255 ntBASIC13.85□□□□□ -0.19
Shmt1P50431 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.85□□□□□ -0.19
Shmt1P50431 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Shmt1P50431 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shmt1P50431 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Shmt1P50431 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms