Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.52□□□□□ -0.57
GdnfP48540 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.52□□□□□ -0.57
GdnfP48540 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
GdnfP48540 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.52□□□□□ -0.57
GdnfP48540 Auts2-212ENSMUST00000178555 309 ntBASIC11.52□□□□□ -0.57
GdnfP48540 Mir7023-201ENSMUST00000185093 64 ntBASIC11.52□□□□□ -0.57
GdnfP48540 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.52□□□□□ -0.57
GdnfP48540 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.52□□□□□ -0.57
GdnfP48540 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
GdnfP48540 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.52□□□□□ -0.57
GdnfP48540 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.52□□□□□ -0.57
GdnfP48540 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.52□□□□□ -0.57
GdnfP48540 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
GdnfP48540 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GdnfP48540 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
GdnfP48540 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.51□□□□□ -0.57
GdnfP48540 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
GdnfP48540 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
GdnfP48540 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
GdnfP48540 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.51□□□□□ -0.57
GdnfP48540 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.51□□□□□ -0.57
GdnfP48540 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.51□□□□□ -0.57
GdnfP48540 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.51□□□□□ -0.57
GdnfP48540 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
GdnfP48540 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.51□□□□□ -0.57
GdnfP48540 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.51□□□□□ -0.57
GdnfP48540 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Matn2-203ENSMUST00000226766 3252 ntBASIC11.51□□□□□ -0.57
GdnfP48540 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.51□□□□□ -0.57
GdnfP48540 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.51□□□□□ -0.57
GdnfP48540 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GdnfP48540 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms