Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.01□□□□□ -0.65
Hmx3P42581 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.01□□□□□ -0.65
Hmx3P42581 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hmx3P42581 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.01□□□□□ -0.65
Hmx3P42581 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Hmx3P42581 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.01□□□□□ -0.65
Hmx3P42581 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmx3P42581 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hmx3P42581 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Hmx3P42581 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hmx3P42581 Gm44891-201ENSMUST00000208817 2223 ntBASIC11□□□□□ -0.65
Hmx3P42581 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hmx3P42581 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hmx3P42581 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11□□□□□ -0.65
Hmx3P42581 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11□□□□□ -0.65
Hmx3P42581 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hmx3P42581 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Gm29541-201ENSMUST00000191351 678 ntBASIC11□□□□□ -0.65
Hmx3P42581 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 AA619741-201ENSMUST00000195095 646 ntBASIC11□□□□□ -0.65
Hmx3P42581 Gm45453-201ENSMUST00000211758 853 ntBASIC11□□□□□ -0.65
Hmx3P42581 Gm5779-201ENSMUST00000218467 910 ntBASIC11□□□□□ -0.65
Hmx3P42581 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hmx3P42581 Mir125a-201ENSMUST00000083545 68 ntBASIC11□□□□□ -0.65
Hmx3P42581 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Hmx3P42581 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hmx3P42581 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hmx3P42581 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Hmx3P42581 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.99□□□□□ -0.65
Hmx3P42581 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 BC001981-202ENSMUST00000191393 1545 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hmx3P42581 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Hmx3P42581 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmx3P42581 Gm22065-201ENSMUST00000103753 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm22066-201ENSMUST00000103761 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm24932-201ENSMUST00000103763 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm24115-201ENSMUST00000103799 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm22190-201ENSMUST00000103827 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm22191-201ENSMUST00000103831 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm24721-201ENSMUST00000103849 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm28018-201ENSMUST00000103869 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm26399-201ENSMUST00000103937 110 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hmx3P42581 Gm9719-201ENSMUST00000162765 543 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 AA543401-201ENSMUST00000164248 1269 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm6736-201ENSMUST00000166583 948 ntBASIC10.99□□□□□ -0.65
Hmx3P42581 Gm25349-201ENSMUST00000177728 110 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms