Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd40lgP27548 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cd40lgP27548 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.14□□□□□ -0.47
Cd40lgP27548 Gm44397-201ENSMUST00000195950 113 ntBASIC12.14□□□□□ -0.47
Cd40lgP27548 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd40lgP27548 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.14□□□□□ -0.47
Cd40lgP27548 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.13□□□□□ -0.47
Cd40lgP27548 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm12928-201ENSMUST00000117115 573 ntBASIC12.13□□□□□ -0.47
Cd40lgP27548 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.13□□□□□ -0.47
Cd40lgP27548 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm27892-201ENSMUST00000185017 106 ntBASIC12.13□□□□□ -0.47
Cd40lgP27548 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.13□□□□□ -0.47
Cd40lgP27548 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cd40lgP27548 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Cd40lgP27548 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cd40lgP27548 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gm4984-201ENSMUST00000115987 360 ntBASIC12.12□□□□□ -0.47
Cd40lgP27548 Mir1894-201ENSMUST00000122802 81 ntBASIC12.12□□□□□ -0.47
Cd40lgP27548 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms