Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Efnb3O35393 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Efnb3O35393 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.38□□□□□ -0.75
Efnb3O35393 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm27622-201ENSMUST00000183779 60 ntBASIC10.38□□□□□ -0.75
Efnb3O35393 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm9229-201ENSMUST00000222777 126 ntBASIC10.38□□□□□ -0.75
Efnb3O35393 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Efnb3O35393 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Efnb3O35393 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Efnb3O35393 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Efnb3O35393 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Efnb3O35393 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Efnb3O35393 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Efnb3O35393 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Efnb3O35393 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.37□□□□□ -0.75
Efnb3O35393 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.37□□□□□ -0.75
Efnb3O35393 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.37□□□□□ -0.75
Efnb3O35393 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.37□□□□□ -0.75
Efnb3O35393 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Mir6956-201ENSMUST00000183598 62 ntBASIC10.37□□□□□ -0.75
Efnb3O35393 Gm19931-201ENSMUST00000198920 368 ntBASIC10.37□□□□□ -0.75
Efnb3O35393 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.37□□□□□ -0.75
Efnb3O35393 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.37□□□□□ -0.75
Efnb3O35393 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.37□□□□□ -0.75
Efnb3O35393 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms