Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.23□□□□□ -0.45
Hps1O08983 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hps1O08983 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Hps1O08983 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Hps1O08983 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Gm3436-201ENSMUST00000179930 840 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Gm46209-201ENSMUST00000217912 553 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Shd-206ENSMUST00000225145 998 ntBASIC12.23□□□□□ -0.45
Hps1O08983 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hps1O08983 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hps1O08983 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hps1O08983 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.23□□□□□ -0.45
Hps1O08983 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.22□□□□□ -0.45
Hps1O08983 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.22□□□□□ -0.45
Hps1O08983 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Hps1O08983 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.22□□□□□ -0.45
Hps1O08983 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.22□□□□□ -0.45
Hps1O08983 Gm11918-201ENSMUST00000121660 179 ntBASIC12.22□□□□□ -0.45
Hps1O08983 Gm12138-201ENSMUST00000122180 951 ntBASIC12.22□□□□□ -0.45
Hps1O08983 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hps1O08983 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.22□□□□□ -0.45
Hps1O08983 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.22□□□□□ -0.45
Hps1O08983 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Gm37917-201ENSMUST00000194711 392 ntBASIC12.22□□□□□ -0.45
Hps1O08983 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hps1O08983 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hps1O08983 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hps1O08983 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.22□□□□□ -0.45
Hps1O08983 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hps1O08983 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.21□□□□□ -0.45
Hps1O08983 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.21□□□□□ -0.45
Hps1O08983 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.21□□□□□ -0.45
Hps1O08983 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.21□□□□□ -0.45
Hps1O08983 Gm4875-201ENSMUST00000118257 786 ntBASIC12.21□□□□□ -0.45
Hps1O08983 Mir1897-201ENSMUST00000122581 272 ntBASIC12.21□□□□□ -0.45
Hps1O08983 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Hps1O08983 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hps1O08983 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms