Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.35■□□□□ 0.05
Tcof1O08784 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.35■□□□□ 0.05
Tcof1O08784 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Tcof1O08784 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.35■□□□□ 0.05
Tcof1O08784 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Gm27572-201ENSMUST00000183702 255 ntBASIC15.35■□□□□ 0.05
Tcof1O08784 Gm43179-201ENSMUST00000198797 275 ntBASIC15.35■□□□□ 0.05
Tcof1O08784 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tcof1O08784 Gm10268-201ENSMUST00000085340 555 ntBASIC15.35■□□□□ 0.05
Tcof1O08784 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Tcof1O08784 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Tcof1O08784 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcof1O08784 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tcof1O08784 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.34■□□□□ 0.05
Tcof1O08784 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Tcof1O08784 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.34■□□□□ 0.05
Tcof1O08784 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.34■□□□□ 0.05
Tcof1O08784 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Tcof1O08784 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Mir686-201ENSMUST00000102174 109 ntBASIC15.34■□□□□ 0.05
Tcof1O08784 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Gm5187-201ENSMUST00000117317 991 ntBASIC15.34■□□□□ 0.05
Tcof1O08784 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.34■□□□□ 0.05
Tcof1O08784 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Tcof1O08784 Gm5370-201ENSMUST00000187187 574 ntBASIC15.34■□□□□ 0.05
Tcof1O08784 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.34■□□□□ 0.05
Tcof1O08784 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tcof1O08784 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tcof1O08784 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tcof1O08784 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tcof1O08784 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tcof1O08784 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcof1O08784 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.33■□□□□ 0.05
Tcof1O08784 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tcof1O08784 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.33■□□□□ 0.05
Tcof1O08784 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.33■□□□□ 0.05
Tcof1O08784 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcof1O08784 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Tcof1O08784 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Tcof1O08784 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.33■□□□□ 0.04
Tcof1O08784 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Tcof1O08784 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.33■□□□□ 0.04
Tcof1O08784 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.33■□□□□ 0.04
Tcof1O08784 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.33■□□□□ 0.04
Tcof1O08784 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms