Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Mir7684-201ENSMUST00000183858 60 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm27772-201ENSMUST00000184900 187 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm5279-201ENSMUST00000199575 745 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp4cQ9D7F7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm44855-201ENSMUST00000205725 362 ntBASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.72■□□□□ 0.11
Chmp4cQ9D7F7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Gm24694-201ENSMUST00000180054 110 ntBASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Gm27663-201ENSMUST00000184839 110 ntBASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Gm17330-201ENSMUST00000221047 165 ntBASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Paupar-201ENSMUST00000194826 3482 ntBASIC15.71■□□□□ 0.11
Chmp4cQ9D7F7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.71■□□□□ 0.1
Chmp4cQ9D7F7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Chmp4cQ9D7F7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms