Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm13365-201ENSMUST00000121188 973 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm43125-201ENSMUST00000201724 730 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Krt88Q9CPR6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Gm12585-201ENSMUST00000117307 290 ntBASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Mir6990-201ENSMUST00000183724 91 ntBASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krt88Q9CPR6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Krt88Q9CPR6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Krt88Q9CPR6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Krt88Q9CPR6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Krt88Q9CPR6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms