Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf111Q99ML9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms