Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Gm5370-201ENSMUST00000187187 574 ntBASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Gm42693-201ENSMUST00000196779 631 ntBASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ndc1Q8VCB1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm4271-201ENSMUST00000174444 973 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm27572-201ENSMUST00000183702 255 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Gm16372-201ENSMUST00000073088 450 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ndc1Q8VCB1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm14350-201ENSMUST00000116642 640 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms