Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sfr1Q8BP27 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sfr1Q8BP27 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sfr1Q8BP27 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gm13612-201ENSMUST00000119276 390 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sfr1Q8BP27 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Grk6-205ENSMUST00000224653 2976 ntBASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sfr1Q8BP27 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sfr1Q8BP27 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms