Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Gm8598-201ENSMUST00000221184 836 ntBASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atg4bQ8BGE6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atg4bQ8BGE6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Atg4bQ8BGE6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atg4bQ8BGE6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm15806-201ENSMUST00000120696 955 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm9002-201ENSMUST00000178437 499 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm27892-201ENSMUST00000185017 106 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm19931-201ENSMUST00000198920 368 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm44069-201ENSMUST00000204898 506 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm5356-201ENSMUST00000093326 615 ntBASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4bQ8BGE6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm16202-201ENSMUST00000117532 544 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Mir1894-201ENSMUST00000122802 81 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms