Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm37008-201ENSMUST00000195712 319 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm45331-201ENSMUST00000209868 554 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdh19Q80TF3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh19Q80TF3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh19Q80TF3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm16479-201ENSMUST00000121706 932 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.89□□□□□ -0.35
Pcdh19Q80TF3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms