Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb4Q6P8W9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm18054-201ENSMUST00000207539 555 ntBASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm6013-201ENSMUST00000212264 699 ntBASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmgb4Q6P8W9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb4Q6P8W9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb4Q6P8W9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb4Q6P8W9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmgb4Q6P8W9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb4Q6P8W9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hmgb4Q6P8W9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb4Q6P8W9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Hmgb4Q6P8W9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmgb4Q6P8W9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms