Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.17■□□□□ 0.02
Scn9aQ62205 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Scn9aQ62205 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm11941-201ENSMUST00000119904 610 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 AY036118-201ENSMUST00000200021 923 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Gm19994-201ENSMUST00000217086 586 ntBASIC15.16■□□□□ 0.02
Scn9aQ62205 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.16■□□□□ 0.02
Scn9aQ62205 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn9aQ62205 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn9aQ62205 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.15■□□□□ 0.02
Scn9aQ62205 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.15■□□□□ 0.02
Scn9aQ62205 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.15■□□□□ 0.02
Scn9aQ62205 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn9aQ62205 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.15■□□□□ 0.02
Scn9aQ62205 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn9aQ62205 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Gm27627-201ENSMUST00000183644 150 ntBASIC15.15■□□□□ 0.02
Scn9aQ62205 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn9aQ62205 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn9aQ62205 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Scn9aQ62205 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm15711-201ENSMUST00000118889 535 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm13888-201ENSMUST00000119148 422 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 Gm12029-201ENSMUST00000120073 832 ntBASIC15.14■□□□□ 0.01
Scn9aQ62205 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms