Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm15432-201ENSMUST00000121106 195 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm22121-201ENSMUST00000175148 54 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gzmn-202ENSMUST00000225535 989 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm22058-201ENSMUST00000083393 310 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Efs-202ENSMUST00000227037 2540 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fam196aQ3USH1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.15□□□□□ -0.3
Fam196aQ3USH1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Gm10312-201ENSMUST00000078515 489 ntBASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.15□□□□□ -0.3
Fam196aQ3USH1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms