Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm24548-201ENSMUST00000158650 108 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm43822-201ENSMUST00000200285 476 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm3961-201ENSMUST00000204425 994 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Cts7-204ENSMUST00000225321 1257 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx27Q3UHD6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.18□□□□□ -0.14
Snx27Q3UHD6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx27Q3UHD6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms