Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Uchl4P58321 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Uchl4P58321 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Uchl4P58321 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 Gm40466-201ENSMUST00000212174 422 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.99□□□□□ -0.17
Uchl4P58321 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Uchl4P58321 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Uchl4P58321 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Uchl4P58321 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Uchl4P58321 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Uchl4P58321 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Uchl4P58321 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Uchl4P58321 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Uchl4P58321 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.98□□□□□ -0.17
Uchl4P58321 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Uchl4P58321 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.98□□□□□ -0.17
Uchl4P58321 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.98□□□□□ -0.17
Uchl4P58321 Gm27731-201ENSMUST00000185192 107 ntBASIC13.98□□□□□ -0.17
Uchl4P58321 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.98□□□□□ -0.17
Uchl4P58321 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.98□□□□□ -0.17
Uchl4P58321 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uchl4P58321 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Uchl4P58321 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Uchl4P58321 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Uchl4P58321 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Gm16202-201ENSMUST00000117532 544 ntBASIC13.97□□□□□ -0.17
Uchl4P58321 Gm11618-201ENSMUST00000117946 267 ntBASIC13.97□□□□□ -0.17
Uchl4P58321 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uchl4P58321 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Uchl4P58321 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms