Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn1aP39689 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cdkn1aP39689 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm25927-201ENSMUST00000175058 117 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm45331-201ENSMUST00000209868 554 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.83□□□□□ -0.68
Cdkn1aP39689 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn1aP39689 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm6013-201ENSMUST00000212264 699 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms